STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0788Possible Major Facilitator Superfamily (MFS) efflux pump. (471 aa)    
Predicted Functional Partners:
rmrA
Putative hlyD family multidrug secretion protein; Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577.
 
 0.687
emrA
Putative multidrug resistance protein.
 
 
 0.684
RPA3543
Possible multidrug resistance efflux pump.
 
 0.683
RPA0515
Possible efflux pump protein FarA.
 
 
 0.644
RPA2878
Possible MDR related permease.
  
  
 0.643
htpX-2
Putative heat shock protein (htpX); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the peptidase M48B family.
  
  
 0.465
RPA1880
Putative membrane transport protein-major facilitator superfamily.
  
   
0.444
RPA1648
Membrane permeases, predicted cation efflux pumps; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.401
mcyE
Possible McyE polykeitde synthase and peptide synthetase (AF183408).
 
  
 0.401
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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