Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0810Permeases of the drug/metabolite transporter (DMT) superfamily. (306 aa)    
Predicted Functional Partners:
RPA0809
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.675
RPA2976
Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.632
RPA4299
Permeases of the drug/metabolite transporter (DMT) superfamily.
  
    0.546
RPA0811
Putative manganese transp.
       0.545
RPA4300
Permeases of the drug/metabolite transporter (DMT) superfamily.
  
    0.523
RPA1283
Homoserine/homoserine lactone/threonine efflux protein.
  
   
 0.483
RPA3814
Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 
 0.430
RPA0900
Probable Rht family transporter, amino acid efflux.
  
   
 0.428
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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