Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0821Transcriptional regulator, MarR family. (188 aa)    
Predicted Functional Partners:
gshA
Gamma-glutamylcysteine synthetase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
       0.691
gst2
Putative glutathionine S-transferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
 0.570
RPA2039
Possible choline ABC transporter permease and substrate binding protein.
  
  
 0.510
RPA1154
Conserved hypothetical protein.
  
     0.498
RPA3393
Conserved hypothetical protein.
  
     0.492
RPA0249
Hypothetical protein; InterPro IPR000104:IPR000694.
  
   
 0.491
RPA1616
Conserved hypothetical protein.
  
     0.482
RPA3825
Conserved hypothetical protein; InterPro IPR000918 COGs COG2513.
  
     0.475
RPA2044
Conserved unknown protein.
  
    0.448
RPA0823
Apple domain:N/apple PAN.
       0.430
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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