STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0852Two-component transcriptional regulator, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (225 aa)    
Predicted Functional Partners:
RPA3018
Response regulator receiver:histidine kinase.
 
 
 0.957
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
  
 
 0.904
RPA1681
Sensor histidine kinase with a response regulator receiver domain.
 
 
 0.900
RPA0853
Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.899
RPA1249
Sensor histidine kinase with a response regulator receiver domain.
  
 
 0.527
RPA0494
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains.
  
 
 0.507
RPA0583
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.507
RPA1558
Sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain.
  
 
 0.507
RPA4753
Histidine kinase with a response regulator receiver domain.
 
 
 0.495
RPA2107
Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain.
  
 
 0.481
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.