Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA0878Transcriptional regulator, AraC type; possible DNA gyrase inhibitor. (301 aa)    
Predicted Functional Partners:
kdpD
Two component osmosensitive K+channel and sensor histidine kinase, KdpD.
     
 0.745
RPA2110
Probable transcriptional regulator, AraC family.
 
     0.646
RPA2478
Probable transcriptional regulator, AraC family.
 
 
 0.627
RPA1321
Probable transcriptional regulator, AraC family.
 
    0.611
RPA1988
Probable transcriptional regulator, AraC family.
 
 
 0.572
RPA1078
Probable transcriptional regulator, AraC family.
 
     0.529
pchR
Putative transcriptional regulator PchR, AraC family.
 
     0.449
RPA0902
Glyoxalase/Bleomycin resistance protein/dioxygenase domain.
 
    0.444
RPA2404
Probable transcriptional regulator, AraC family.
 
 
 0.418
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.412
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.