STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0883ABC transporter, ATP-binding protein. (264 aa)    
Predicted Functional Partners:
RPA0882
ABC transporter, permease.
  
 0.933
RPA0884
ABC transporter, substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.897
RPA4162
Putative taurine ABC transport system permease protein.
  
 0.872
RPA2042
Putative ABC transporter, permease protein.
  
 0.867
RPA2678
Putative permease protein, subunit of ABC transporter.
  
 0.857
RPA2498
Possible ABC transporter, permease protein.
  
 0.854
RPA3383
Possible taurine transport system permease protein.
  
 0.843
cysT
Putative sulfate ABC transporter, permease component; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.842
RPA1363
Sulfate ester transport system permease protein.
 
  
 0.838
RPA3707
Possible nitrate transporter component, nrtA.
  
 0.832
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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