Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0884ABC transporter, substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (332 aa)    
Predicted Functional Partners:
RPA2631
Possible ABC transport substrate-binding periplasmic protein.
  
 
  0.918
RPA1362
Putative sulfate ester transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
  0.916
RPA0882
ABC transporter, permease.
 
 
 0.915
RPA0883
ABC transporter, ATP-binding protein.
 
 
 0.915
RPA2043
Putative ABC transporter, periplasmic substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 
0.913
RPA2608
Possible sulfonate binding protein.
     
  0.900
RPA2613
Putative aliphatic sulfonate binding protein, subunit of ABC transporter.
     
  0.900
RPA2618
Putative sulfonate transport system substrate-binding protein.
     
  0.900
RPA2624
Putative sulfonate transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
  0.900
RPA2042
Putative ABC transporter, permease protein.
 
 
 0.879
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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