Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA0919ABC transporter, ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (634 aa)    
Predicted Functional Partners:
lpxK
Putative tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.824
RPA1364
Sulfate ester transport system ATP-binding protein.
   
0.749
RPA2005
ABC transporter, fused ATPase and permease domain.
  
0.610
dnaK
Heat shock protein DnaK (70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.601
RPA1259
Putative cation-transporting P-type ATPase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.589
RPA4084
AAA ATPase; Belongs to the AAA ATPase family.
 
 
 0.589
kpsF
CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the SIS family. GutQ/KpsF subfamily.
 
   
 0.558
RPA0682
Possible ABC transporter ATP-binding component, membrane bound.
  
 0.551
RPA4087
ABC-2 type transport system permease and double ATP-binding protein fusion.
  
 0.551
rpmE
Possible 50S ribosomal protein L31; Binds the 23S rRNA.
       0.550
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.