Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA0941Conserved hypothetical protein; COGs COG2337. (107 aa)    
Predicted Functional Partners:
RPA4756
Helix-turn-helix protein, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
  
 
 0.940
RPA0942
Conserved hypothetical protein.
     
 0.851
RPA0939
Possible thiamine-phosphate pyrophosphorylase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.666
RPA0940
Fructose-bisphosphate aldolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the class I fructose-bisphosphate aldolase family.
       0.619
cbbK
Phosphoglycerate kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the phosphoglycerate kinase family.
  
  
 0.589
RPA0938
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.588
RPA2979
Conserved hypothetical protein.
  
   
 0.581
RPA0326
DUF24, predicted transcriptional regulator, related to MarR family.
   
    0.520
RPA2702
DUF24, predicted transcriptional regulator, related to MarR family.
   
    0.520
RPA3222
DUF24, predicted transcriptional regulator, related to MarR family.
   
    0.520
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.