Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1011DSBA oxidoreductase. (217 aa)    
Predicted Functional Partners:
hrpB
Putative ATP-dependent helicase.
      
 0.741
RPA0567
Probable transcriptional regulator, AraC family.
      
 0.741
nadA
Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
      
 0.741
RPA0022
DSBA oxidoreductase.
  
     0.716
RPA0815
Conserved hypothetical protein.
  
   
 0.693
RPA2183
DSBA oxidoreductase.
  
     0.647
RPA1593
Thioesterase superfamily.
 
     0.615
RPA3624
Possible gluconolactonase precursor; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.599
RPA1780
Phenylacetic acid degradation-related protein.
 
     0.587
RPA1010
Beta-lactamase-like:ATP/GTP-binding site motif A (P-loop).
 
     0.584
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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