Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1208Putative dioxygenase. (467 aa)    
Predicted Functional Partners:
RPA1209
Conserved hypothetical protein.
       0.683
RPA1210
Conserved hypothetical protein; InterPro IPR001687 COGs COG0714.
       0.683
RPA1211
Hypothetical protein.
       0.647
RPA0935
Conserved hypothetical protein; InterPro IPR000379 COGs COG1073.
 
    0.556
arsM
UbiE/COQ5 methyltransferase; Catalyzes the transfer of a methyl group from AdoMet to arsenite, producing methylated arsenicals. Involved in the conversion of As(III) to a number of di- and trimethylated species, with trimethylarsine as the end product. Reduces the arsenic toxicity in the cell and may contribute to the global arsenic cycling.
      
 0.546
RPA2170
Hypothetical protein; InterPro IPR007113.
      
 0.541
RPA2362
Putative O-acetylhomoserine sulfhydrylase.
      
 0.541
RPA2160
Short chain dehydrogenase.
      
 0.524
RPA0441
Conserved hypothetical protein.
  
   
 0.516
RPA4286
Catalytic LigB subunit of aromatic ring-opening dioxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
      
 0.506
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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