Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1214Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (550 aa)    
Predicted Functional Partners:
RPA1215
Putative ABC transporter, permease protein.
 
 0.990
RPA2644
Putative ABC transporter permease protein.
 
 0.982
oppC
Putative ABC transporter permease protein.
 
 0.980
RPA1471
Putative dipeptide ABC transporter (permease).
 
 0.970
RPA2329
Putative ABC transporter permease protein.
 
 0.970
RPA1448
Putative oligopeptide ABC transporter (permease).
 
 0.966
RPA0759
Putative oligopeptide ABC transporter, permease component.
 
 0.960
RPA1216
Putative ABC transporter, permease protein.
 
 0.924
RPA2645
Putative ABC transporter permease protein.
 
 
 0.804
RPA2328
Putative ABC transporter permease protein.
 
 
 0.792
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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