Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
RPA1218Putative ABC transporter periplasmic protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (537 aa)    
Predicted Functional Partners:
RPA1216
Putative ABC transporter, permease protein.
 
 
 0.910
RPA1215
Putative ABC transporter, permease protein.
 
 
 0.897
RPA1217
Putative carboxypeptidase G2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.866
RPA1213
Conserved unknown protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.809
RPA4721
possible+E2677 pyruvate-flavodoxin oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.745
RPA0760
Putative oligopeptide ABC transporter, permease component.
 
 
 0.714
RPA1214
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.704
RPA2645
Putative ABC transporter permease protein.
 
 
 0.700
RPA1447
Putative oligopeptide ABC transporter (permease).
 
 
 0.674
RPA2328
Putative ABC transporter permease protein.
 
 
 0.669
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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