STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1291Putative proteic killer suppression protein. (96 aa)    
Predicted Functional Partners:
RPA1290
Possible plasmid maintenance system antidote protein.
 
 
 0.989
RPA2282
Conserved hypothetical protein; COGs COG3093.
 
 
 0.955
RPA2283
Putative proteic killer suppression protein {plasmid Rts1).
  
    0.780
RPA3826
Conserved hypothetical protein; COGs COG3657.
 
    0.442
RPA0941
Conserved hypothetical protein; COGs COG2337.
 
  
 0.430
RPA3162
Transcriptional regulator, XRE family.
 
   
 0.424
RPA1292
Hypothetical protein.
  
    0.415
RPA1293
Putative IS5 transposase.
  
    0.415
vapC
Possible NtrR protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
    0.402
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.