Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1320Conserved hypothetical protein; InterPro IPR001607. (102 aa)    
Predicted Functional Partners:
nha
Possible sodium/hydrogen antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
    0.933
kefB
Possible glutathione-regulated potassium-efflux system protein kefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.889
kefC
Putative potassium efflux transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
    
 0.863
RPA4536
Cyclic nucleotide regulated pyridine nucleotide-disulphide oxidoreductase.
 
 
 
 0.854
RPA3594
Conserved hypothetical protein; COGs COG0840.
  
     0.677
RPA1321
Probable transcriptional regulator, AraC family.
 
    0.560
RPA2106
Conserved unknown protein; InterPro IPR000379:IPR000734 COGs COG0596.
  
  
 0.543
RPA3814
Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
 0.542
cioB
Possible cytochrome bd-I oxidase subunit I [EC:1.10.3.-]; 3 probable transmembrane helices predicted byTMHMM2.0.
       0.525
RPA1795
Possible potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
    
 0.475
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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