Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPA1342 | RPA1343 | Hypothetical protein. | Conserved hypothetical protein; COGs COG0265. | 0.538 |
RPA1342 | RPA1344 | Hypothetical protein. | Hypothetical protein. | 0.438 |
RPA1343 | RPA1342 | Conserved hypothetical protein; COGs COG0265. | Hypothetical protein. | 0.538 |
RPA1343 | RPA1344 | Conserved hypothetical protein; COGs COG0265. | Hypothetical protein. | 0.622 |
RPA1343 | RPA1345 | Conserved hypothetical protein; COGs COG0265. | Conserved hypothetical protein. | 0.406 |
RPA1343 | RPA1346 | Conserved hypothetical protein; COGs COG0265. | Possible TonB protein, possible colicin J receptor. | 0.471 |
RPA1344 | RPA1342 | Hypothetical protein. | Hypothetical protein. | 0.438 |
RPA1344 | RPA1343 | Hypothetical protein. | Conserved hypothetical protein; COGs COG0265. | 0.622 |
RPA1344 | RPA1345 | Hypothetical protein. | Conserved hypothetical protein. | 0.482 |
RPA1344 | RPA1346 | Hypothetical protein. | Possible TonB protein, possible colicin J receptor. | 0.452 |
RPA1345 | RPA1343 | Conserved hypothetical protein. | Conserved hypothetical protein; COGs COG0265. | 0.406 |
RPA1345 | RPA1344 | Conserved hypothetical protein. | Hypothetical protein. | 0.482 |
RPA1345 | RPA1346 | Conserved hypothetical protein. | Possible TonB protein, possible colicin J receptor. | 0.787 |
RPA1346 | RPA1343 | Possible TonB protein, possible colicin J receptor. | Conserved hypothetical protein; COGs COG0265. | 0.471 |
RPA1346 | RPA1344 | Possible TonB protein, possible colicin J receptor. | Hypothetical protein. | 0.452 |
RPA1346 | RPA1345 | Possible TonB protein, possible colicin J receptor. | Conserved hypothetical protein. | 0.787 |