Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
RPA1365Putative sulfatase. (554 aa)    
Predicted Functional Partners:
RPA4146
DUF323.
 
   0.836
RPA1364
Sulfate ester transport system ATP-binding protein.
  
  
 0.801
RPA1363
Sulfate ester transport system permease protein.
  
  
 0.672
RPA1362
Putative sulfate ester transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.666
RPA1605
Conserved hypothetical protein; COGs COG1262.
  
   0.558
gltB
Glutamate synthase, large subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
  
 0.479
hpcD
Putative 5-carboxymethyl-2-hydroxymuconate isomerase.
  
     0.408
RPA4744
Possible thioredoxin-like protein.
  
 
 0.401
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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