STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1387Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (430 aa)    
Predicted Functional Partners:
RPA1384
Putative vanadium/vanadate permease component of ATP-dependent vanadium/vanadate uptake system; Conserved in vnf operon of Azotobacter vinelandii.
  
    0.603
RPA1385
Putative vanadium/vanadate transport system substrate-binding protein; Conserved in vnf operon of Azotobacter vinelandii.
  
    0.592
phnC2
Putative ATP-binding component of ABC vanadium/ vanadate transporter; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
    0.592
RPA1390
Conserved hypothetical protein; InterPro IPR001687 COGs COG0378.
 
    0.590
RPA1391
Possible ABC transporter ATP-binding protein.
 
    0.562
RPA2510
Conserved hypothetical protein; COGs COG1289.
  
    0.521
badL
Possible acetyltransferase.
 
    0.480
RPA1388
Hypothetical protein.
  
    0.434
RPA1389
Conserved hypothetical protein; InterPro IPR000276 COGs COG1840.
  
    0.430
RPA1392
Nitroreductase family proteins.
  
    0.429
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.