Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1396Possible multiple sugar transport system permease protein. (351 aa)    
Predicted Functional Partners:
RPA1397
Putative sugar ABC transporter, permease protein.
 
 0.981
RPA1398
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.977
RPA1399
Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.977
RPA1395
Possible trehalose/maltose binding protein.
 
 
 0.939
RPA3468
Putative permease protein of sugar ABC transporter.
 
 0.932
RPA0127
Putative permease protein of sugar ABC transporter.
 
 0.924
RPA3471
ABC transporter, ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the ABC transporter superfamily.
 
 
 0.908
ugpC
ATP-binding component of sn-glycerol 3-phosphate transport system; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.907
RPA0129
Putative sugar binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.906
ugpE
Sn-glycerol 3-phosphate transport system, integral membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.900
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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