Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPA1398Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (367 aa)    
Predicted Functional Partners:
RPA1396
Possible multiple sugar transport system permease protein.
 
 
 0.977
RPA1397
Putative sugar ABC transporter, permease protein.
 
 
 0.975
RPA1399
Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.915
RPA0128
Possible permease protein of sugar ABC transporter.
 
 
 0.901
RPA1395
Possible trehalose/maltose binding protein.
 
 
 0.895
RPA0127
Putative permease protein of sugar ABC transporter.
 
 
 0.892
RPA3469
Probable permease protein of sugar ABC transporter.
 
 
 0.891
RPA3468
Putative permease protein of sugar ABC transporter.
 
 
 0.886
ndvA
Putative beta-1,2-glucan ABC export system ATP-binding protein ndvA; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity).
 
     
0.881
RPA1444
Putative oligopeptide binding protein precursor; Belongs to the ABC transporter superfamily.
 
    
0.845
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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