STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1399Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
RPA1396
Possible multiple sugar transport system permease protein.
 
 
 0.978
RPA1397
Putative sugar ABC transporter, permease protein.
 
 
 0.976
RPA0128
Possible permease protein of sugar ABC transporter.
 
 
 0.906
RPA0127
Putative permease protein of sugar ABC transporter.
 
 0.898
RPA3469
Probable permease protein of sugar ABC transporter.
 
 
 0.898
RPA3468
Putative permease protein of sugar ABC transporter.
 
 0.889
ugpE
Sn-glycerol 3-phosphate transport system, integral membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.886
RPA1398
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.881
RPA1395
Possible trehalose/maltose binding protein.
 
 
 0.880
ugpA
Sn-glycerol-3-phosphate transport system permease protein.
 
 
 0.846
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.