Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1400Possible Glutamine amidotransferase. (261 aa)    
Predicted Functional Partners:
RPA1403
Possible Glutamine amidotransferase.
 
     0.852
glnAIII
Putative glutamine synthetase III.
 
   
 0.834
RPA1396
Possible multiple sugar transport system permease protein.
  
    0.778
RPA1399
Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.776
RPA1397
Putative sugar ABC transporter, permease protein.
       0.773
RPA1398
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
RPA1402
Putative Glu-tRNA amidotransferase, subunit A; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the amidase family.
  
  
 0.760
RPA1395
Possible trehalose/maltose binding protein.
 
     0.729
guaB
Inosine monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.664
argS
arginyl-tRNA synthetase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.564
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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