Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1476Putative periplasmic solute-binding protein. (335 aa)    
Predicted Functional Partners:
RPA1478
Putative permease protein.
 
  
 0.992
RPA1477
Putative permease protein.
 
  
 0.991
RPA1479
Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.983
potA
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 
 0.924
RPA4649
Probable ABC transporter permease protein.
    
 0.921
cpdA
Putative ICC protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
    0.913
RPA4648
Possible ABC transporter binding protein component; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
 
  0.903
fpbB
Putative iron transport system permease protein.
  
  
 0.726
RPA3454
Putative transmembrane transport protein, MFS family.
  
  
 0.543
RPA4808
Possible hexuronate transporter.
  
  
 0.543
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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