Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pufMPhotosynthetic reaction center M protein; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (307 aa)    
Predicted Functional Partners:
pufB
Light-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufA
Light-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufL
Photosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
0.999
puhA
H subunit of photosynthetic reaction center complex; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.999
bchX
Bacteriochlorophyllide reductase subunit BchX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the NifH/BchL/ChlL family.
 
  
 0.922
bchZ
Bacteriochlorophyllide reductase subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.922
RPA1531
Possible Bch2, light harvesting pigment Major Facilitator Family (MFS) transporter.
 
  
 0.905
bchG
Geranylgeranyl bacteriochlorophyll synthase.
 
  
 0.891
lhaA
MFS transporter, BCD family, chlorophyll transporter; Photosynthetic complex (LH1) assembly protein LhaA, probable Major Facilitator Superfamily (MFS) transporter.
  
  
 0.885
RPA1549
Possible photosynthetic complex assembly protein.
  
    0.882
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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