Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
cbbXcbbX protein homolog. (308 aa)    
Predicted Functional Partners:
cbbS
Ribulose-bisphosphate carboxylase small chain.
 
  
 0.993
cbbL
Ribulose-bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
  
 0.992
RPA0954
Possible histone deacetylase or acetylpolyamine aminohydrolase or acetoin utilization protein.
   
 0.864
dnaK
Heat shock protein DnaK (70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.827
RPA3200
Putative dual serine/threonine-protein kinase/phosphatase.
  
 
 0.807
RPA3814
Calcium-binding EF-hand; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
 0.801
RPA0814
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.799
cbbR
Cbb operon transcriptional regulator CbbR, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.795
cbbY
Haloacid dehalogenase-like hydrolase.
 
 
 0.779
cbbP
Phosphoribulokinase (phosphopentokinase) (PRK); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.771
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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