Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPA0183 | RPA1671 | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Putative serine/threonine protein kinase. | 0.535 |
RPA0183 | RPA3567 | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Conserved hypothetical protein. | 0.756 |
RPA0853 | RPA1328 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Sensor histidine kinase with a GAF and an unknown domain. | 0.701 |
RPA0853 | RPA1671 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Putative serine/threonine protein kinase. | 0.516 |
RPA0853 | RPA2107 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain. | 0.820 |
RPA0853 | RPA3200 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Putative dual serine/threonine-protein kinase/phosphatase. | 0.593 |
RPA0853 | RPA4417 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Sensor histidine kinase with PAS/PAC and response regulator receiver domains. | 0.987 |
RPA0853 | RPA4536 | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Cyclic nucleotide regulated pyridine nucleotide-disulphide oxidoreductase. | 0.613 |
RPA1328 | RPA0853 | Sensor histidine kinase with a GAF and an unknown domain. | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.701 |
RPA1328 | RPA1671 | Sensor histidine kinase with a GAF and an unknown domain. | Putative serine/threonine protein kinase. | 0.587 |
RPA1328 | RPA2107 | Sensor histidine kinase with a GAF and an unknown domain. | Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain. | 0.672 |
RPA1328 | RPA4417 | Sensor histidine kinase with a GAF and an unknown domain. | Sensor histidine kinase with PAS/PAC and response regulator receiver domains. | 0.916 |
RPA1669 | RPA1670 | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Metallo-phosphoesterase. | 0.478 |
RPA1669 | RPA1671 | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | Putative serine/threonine protein kinase. | 0.491 |
RPA1670 | RPA1669 | Metallo-phosphoesterase. | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.478 |
RPA1670 | RPA1671 | Metallo-phosphoesterase. | Putative serine/threonine protein kinase. | 0.975 |
RPA1670 | RPA3200 | Metallo-phosphoesterase. | Putative dual serine/threonine-protein kinase/phosphatase. | 0.560 |
RPA1670 | RPA3567 | Metallo-phosphoesterase. | Conserved hypothetical protein. | 0.483 |
RPA1671 | RPA0183 | Putative serine/threonine protein kinase. | Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.535 |
RPA1671 | RPA0853 | Putative serine/threonine protein kinase. | Sensor histidine kinase, possible proline sensor PrlS; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.516 |
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