Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
RPA1680Putative response regulator and cylclic diguanylate phosphodiesterase (EAL). (416 aa)    
Predicted Functional Partners:
RPA0767
Putative diguanylate cyclase (GGDEF) with PAS/PAC domain.
 
 0.987
RPA3076
Putative diguanylate cyclase (GGDEF).
 
 0.983
RPA4565
Putative diguanylate cyclase (GGDEF).
 
 0.983
RPA1657
Putative diguanylate cyclase (GGDEF).
  
 0.981
RPA2769
Putative diguanylate cyclase (GGDEF).
  
 0.979
RPA4112
Putative diguanylate cyclase (GGDEF).
 
 0.977
RPA3994
Putative diguanylate cyclase (GGDEF).
  
 0.975
RPA3022
Putative diguanylate cyclase (GGDEF).
 
 0.970
RPA1790
Putative diguanylate cyclase (GGDEF).
 
 0.959
RPA3832
Putative diguanylate cyclase (GGDEF) with PAS/PAC domain.
 
 0.955
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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