STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1785Conserved hypothetical protein; Belongs to the UPF0311 family. (153 aa)    
Predicted Functional Partners:
RPA4198
Amidohydrolase 2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.785
fcs2
Putative feruloyl-CoA synthetase.
 
  
 0.756
RPA3588
Possible FAD-dependent monooxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.706
RPA1786
Putative 3-hydroxybutyryl-CoA dehydratase.
 
 
 
 0.638
fcs1
Putative feruloyl-CoA synthetase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.602
RPA1784
TrapT family, dctM subunit, C4-dicarboxylate transport.
  
   0.581
RPA1783
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
  
    0.570
RPA3761
Putative catechol 2,3-dioxygenase.
 
  
 0.554
phbH
4-hydroxybenzoate hydroxylase (4-hydroxybenzoate-3-monooxygenase).
 
    0.532
RPA1782
TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.513
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.