Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ungUracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein. (495 aa)    
Predicted Functional Partners:
RPA1800
Elongator protein 3/MiaB/NifB.
  
 0.945
RPA2690
Possible uracil-DNA glycosylase.
     
 0.935
polN
Possible phage DNA polymerases.
  
  
0.925
dnaE2
Putative DNA polymerase III alpha chain; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
 
  
 0.723
RPA0452
Glycoprotease (M22) metalloprotease.
  
    0.521
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.502
RPA2076
Putative signal transduction histidine kinase.
  
    0.491
RPA1798
Putative periplasmic binding protein for ABC transporter for branched chain amino acids; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
   0.470
phyB5
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB5.
 
   
 0.465
RPA0802
Possible DNA ligase.
 
     0.459
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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