STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1925Putative transmembrane protein. (488 aa)    
Predicted Functional Partners:
rmrA
Putative hlyD family multidrug secretion protein; Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577.
 
 0.680
RPA1926
Possible transcriptional regulator, XRE family.
 
  
 0.665
RPA3543
Possible multidrug resistance efflux pump.
 
 0.662
emrA
Putative multidrug resistance protein.
 
 0.658
RPA3516
Possible bcr efflux pump, Major Facilitator Superfamily (MFS).
  
   
 0.638
RPA0515
Possible efflux pump protein FarA.
 
 0.623
RPA2878
Possible MDR related permease.
  
  
 0.586
RPA0935
Conserved hypothetical protein; InterPro IPR000379 COGs COG1073.
 
 
    0.551
RPA1924
Cobalamin synthesis protein/P47K.
  
    0.433
RPA2709
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.424
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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