STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1954Probable transcriptional regulator, TetR family. (228 aa)    
Predicted Functional Partners:
RPA3415
Probable transcriptional regulator, TetR family.
  
    0.550
RPA0093
Transcriptional regulator, TetR family.
  
    0.543
RPA1951
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.540
RPA1953
Possible FusB/FusC Fusaric Acid resistance pump.
  
    0.528
RPA1952
Conserved hypothetical membrane protein.
  
    0.525
RPA4108
Probable transcriptional regulator, TetR family.
  
    0.507
RPA3894
Probable transcriptional regulator, TetR family.
  
    0.489
RPA3544
Transcriptional regulator, TetR family.
  
    0.480
RPA1966
Probable transcriptional regulator, TetR family.
  
    0.411
RPA0402
Possible transcriptional regulator, TetR family.
  
     0.401
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.