STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
RPA1960Putative RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (357 aa)    
Predicted Functional Partners:
RPA1961
RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.971
RPA1959
Putative RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 
0.930
RPA1968
RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.856
RPA4414
Putative RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.855
RPA1962
Unknown protein.
       0.784
RPA1963
Patatin-like phospholipase domain.
     
 0.714
RPA1810
Putative outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.685
RPA2581
Putative outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.685
RPA1967
Putative component of multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.653
RPA4679
Possible component of multidrug efflux system.
  
  
  0.651
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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