Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1964Hypothetical protein; InterPro IPR001064. (185 aa)    
Predicted Functional Partners:
RPA1963
Patatin-like phospholipase domain.
     
 0.611
RPA1959
Putative RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.562
RPA1960
Putative RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.562
RPA1961
RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.549
RPA1962
Unknown protein.
       0.536
RPA1958
Transcriptional regulator, TetR family.
  
  
 0.427
RPA0445
Possible HlyC/CorC family of transporters with CBS domains.
   
    0.405
RPA2812
Probable HlyC/CorC family of transporters with 2 CBS domains.
   
    0.405
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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