STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1965Putative Adenylate/Guanylate cyclase. (662 aa)    
Predicted Functional Partners:
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
 
 0.793
RPA3316
Possible chemotaxis cheB/cheR fusion protein.
  
 
 0.748
RPA2107
Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain.
 
 
 0.741
RPA1248
Two-component transcriptional regulator, LuxR family.
 
 0.739
RPA1681
Sensor histidine kinase with a response regulator receiver domain.
 
 
 0.679
RPA0494
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains.
 
 
 0.651
RPA0583
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.647
RPA2290
Conserved hypothetical protein.
 
    0.631
RPA1249
Sensor histidine kinase with a response regulator receiver domain.
 
 
 0.621
RPA0317
Sensor histidine kinase with a response regulator receiver domain.
 
 0.605
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.