STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1966Probable transcriptional regulator, TetR family. (210 aa)    
Predicted Functional Partners:
RPA2294
Probable transcriptional regulator, TetR family.
  
    0.774
RPA3791
Probable transcriptional regulator, TetR family.
  
    0.741
RPA3894
Probable transcriptional regulator, TetR family.
  
    0.710
RPA1958
Transcriptional regulator, TetR family.
  
    0.701
RPA3415
Probable transcriptional regulator, TetR family.
  
    0.564
RPA1967
Putative component of multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.552
RPA1968
RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.531
RPA1965
Putative Adenylate/Guanylate cyclase.
  
    0.431
RPA1954
Probable transcriptional regulator, TetR family.
  
    0.411
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.