Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1977Possible TrapT family, dctQ subunit, glutamate transport; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (198 aa)    
Predicted Functional Partners:
RPA1976
Possible TrapT family, dctM subunit, glutamate transport.
 
 0.995
dctQ2
TrapT dctQ-M fusion permease, dicarboxylate transport.
 
 
  0.933
dctQ1
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
   
 
  0.905
RPA1783
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
   
 
  0.900
RPA2542
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
   
 
  0.900
RPA4555
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
   
 
  0.900
RPA1975
Periplasmic mannitol-binding protein, SmoM; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.843
moaA
Molybdenum biosynthetic protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.554
dctM2
TrapT family, dctM subunit, C4-dicarboxylate transport.
    0.453
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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