Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA1985Probable diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (117 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the CDS family.
    
 0.917
plsC
Putative 1-acyl-SN-glycerol-3-phosphate acyltransferase.
    
 0.907
RPA3968
Putative glycosyl transferase 1.
    
 0.906
RPA0727
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase.
     
  0.900
gpdA
Putative glycerol-3-phosphate dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.840
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.812
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.719
nadE
NH3-dependent NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.714
aroG2
2-dehydro-3-deoxyphosphoheptonate aldolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.689
recO
Putative DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.466
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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