Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2052Putative phophinothricin N-acetyltransferase. (203 aa)    
Predicted Functional Partners:
RPA2051
Putative ornithine decarboxylase.
 
     0.843
ureA
Urease gamma subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the urease gamma subunit family.
  
    0.563
ureD
Possible urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
    0.504
RPA2053
Conserved hypothetical protein.
       0.500
RPA2054
Possible outer membrane protein precursor CzcC.
       0.403
RPA2055
Possible RND divalent metal cation efflux membrane fusion protein CzcB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.403
RPA2157
Conserved hypothetical protein.
   
    0.402
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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