STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2054Possible outer membrane protein precursor CzcC. (423 aa)    
Predicted Functional Partners:
RPA2055
Possible RND divalent metal cation efflux membrane fusion protein CzcB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.970
czcA2
RND divalent metal cation efflux transporter CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.942
ybdE
Putative inner membrane component for iron transport; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.804
RPA1421
Possible efflux protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.804
czcB
Possible RND divalent metal cation efflux membrane fusion protein CzcB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.744
czcA3
Putative heavy metal cation efflux system protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.733
czcA1
Putative RND divalent metal cation efflux transporter CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.732
RPA2057
Hypothetical protein.
  
    0.687
RPA3266
Possible pyridine nucleotide-disulphide oxidored.
  
    0.687
RPA2053
Conserved hypothetical protein.
  
    0.615
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.