STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2069Conserved hypothetical protein. (427 aa)    
Predicted Functional Partners:
ccoO,
Cytochrome-c oxidase fixO chain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.981
ccoQ,
Cytochrome oxidase subunit, small membrane protein.
  
  
 0.868
rdxH,
Conserved hypothetical protein.
  
 
 0.846
RPA2068
Conserved unknown protein; InterPro IPR001455.
  
    0.820
RPA2070
Hypothetical protein.
  
    0.781
norC
Nitric-oxide reductase subunit C.
 
 
 0.741
nosR
Regulatory protein NosR.
 
  
 0.725
RPA2003
Probable cytochrome c precursor.
  
 
 0.689
nosZ
Nitrous-oxide reductase precursor NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
  
 0.640
RPA4469
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.633
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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