Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA2070Hypothetical protein. (169 aa)    
Predicted Functional Partners:
RPA2069
Conserved hypothetical protein.
       0.793
RPA2068
Conserved unknown protein; InterPro IPR001455.
       0.752
RPA2067
Hypothetical protein.
       0.530
nosX
Putative nosX; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.487
nosL
Putative nosL (possibly a disulfide isomerase).
  
    0.450
nosZ
Nitrous-oxide reductase precursor NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
       0.443
nosD
Putative periplasmic ABC transport copper binding protein.
       0.443
nosF
Putative NosF protein (an ABC transporter).
       0.443
nosY
Putative NosY protein, possible ABC permease.
       0.443
nosR
Regulatory protein NosR.
       0.416
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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