Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2076Putative signal transduction histidine kinase. (228 aa)    
Predicted Functional Partners:
RPA2077
Probable transcriptional regulator, Crp/Fnr family.
 
     0.871
phyB2
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2.
     0.833
phyB4
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4.
     0.797
RPA2074
Response regulator receiver (CheY-like protein).
 
   
 0.783
RPA2839
Response regulator receiver (CheY-like protein).
 
  
 0.783
RPA4223
Response regulator receiver (CheY-like protein) with unknown domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
   
 0.779
RPA4512
Possible response regulator receiver.
 
   
 0.748
cheR1
Chemotaxis methyltransferase, CheR1; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
      0.739
phyB1
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1.
     0.727
RPA1246
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.637
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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