STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2104Conserved hypothetical protein. (477 aa)    
Predicted Functional Partners:
RPA2101
Conserved hypothetical protein; COGs COG1574.
 
    0.921
RPA2102
Conserved hypothetical protein.
 
    0.878
RPA2103
Conserved hypothetical protein.
  
    0.811
RPA2100
Possible hydrolase.
 
    0.759
RPA4387
Possible ferrichrome-iron receptor.
  
  
 0.617
RPA3216
Sensor histidine kinase with multiple PAS and a response regulator receiver domain.
  
  
 0.493
RPA1315
Two-component transcriptional regulator, LuxR family.
  
    0.445
RPA1313
Sensor histidine kinase with multiple PAS/PAC domains.
  
    0.424
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.