Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2108Response regulator receiver (CheY-like protein). (128 aa)    
Predicted Functional Partners:
RPA2107
Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain.
 
 
 0.882
RPA1313
Sensor histidine kinase with multiple PAS/PAC domains.
 
 
 0.767
RPA2292
Sensor histidine kinase.
 
 
 0.728
RPA2109
Two-component transcriptional regulator, LuxR family.
 
    
0.611
RPA0583
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 
 0.601
RPA0981
Sensor histidine kinase with multiple PAS and a response regulator receiver domain.
 
 
 0.593
fixL
Two component low oxygen sensor histidine kinase with PAS domains, fixL; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.589
RPA0494
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains.
 
 
 
 0.567
RPA1328
Sensor histidine kinase with a GAF and an unknown domain.
 
 
 0.534
RPA3216
Sensor histidine kinase with multiple PAS and a response regulator receiver domain.
 
 
 0.502
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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