Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA2110Probable transcriptional regulator, AraC family. (202 aa)    
Predicted Functional Partners:
RPA2478
Probable transcriptional regulator, AraC family.
 
 
 0.795
RPA0567
Probable transcriptional regulator, AraC family.
  
     0.722
RPA2404
Probable transcriptional regulator, AraC family.
 
 
 0.690
RPA0878
Transcriptional regulator, AraC type; possible DNA gyrase inhibitor.
 
     0.646
RPA2222
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.541
RPA3796
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.503
RPA0551
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.496
RPA4114
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.491
RPA2107
Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain.
  
 
 0.479
RPA2109
Two-component transcriptional regulator, LuxR family.
       0.465
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.