STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2110Probable transcriptional regulator, AraC family. (202 aa)    
Predicted Functional Partners:
RPA2478
Probable transcriptional regulator, AraC family.
 
 
 0.801
RPA0567
Probable transcriptional regulator, AraC family.
  
     0.722
RPA2404
Probable transcriptional regulator, AraC family.
 
 
 0.697
RPA0878
Transcriptional regulator, AraC type; possible DNA gyrase inhibitor.
 
    0.649
RPA2222
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.546
RPA3796
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.508
RPA0551
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.500
RPA4114
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.497
RPA2107
Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain.
  
 
 0.475
RPA2109
Two-component transcriptional regulator, LuxR family.
  
  
 0.469
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.