Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2120Putative hemin binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (323 aa)    
Predicted Functional Partners:
hmuV
Putative ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.997
RPA2119
Putative permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.986
RPA2309
Putative iron chelatin ABC transporter, permease subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.897
RPA0723
Possible hemin ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.894
RPA0150
Putative ABC transporter, iron, hemin permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.887
RPA2124
tonB dependent iron siderophore receptor; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.840
RPA2121
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.835
RPA2126
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.660
fecE
Putative iron(III) dicitrate ABC transporter, ATP-binding component FecE; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.655
RPA2125
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
    0.636
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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