STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2133Conserved hypothetical protein. (263 aa)    
Predicted Functional Partners:
RPA2132
Hypothetical protein.
 
    0.952
RPA2033
Possible AtsE.
  
    0.620
RPA4223
Response regulator receiver (CheY-like protein) with unknown domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.522
RPA3505
Conserved hypothetical protein.
 
  
 0.498
RPA2131
Hypothetical protein.
  
    0.497
RPA2076
Putative signal transduction histidine kinase.
  
    0.475
RPA2075
Putative signal transduction histidine kinase with GAF and PAS/PAC domains.
 
    0.469
RPA2134
Hypothetical protein.
       0.468
RPA0187
Conserved hypothetical protein.
 
    0.458
RPA0213
Possible OmpA family member; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.444
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.