STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
RPA2172Putative oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)    
Predicted Functional Partners:
RPA2173
GCN5-related N-acetyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.726
RPA3467
Probable UDP-glucose 4-epimerase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    0.667
RPA2174
Conserved hypothetical protein; InterPro IPR001353 COGs COG3484.
       0.646
RPA3552
Putative short-chain dehydrogenase/reductase.
  
  
 0.609
ucpA
Putative oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.574
RPA1737
Possible dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
   
 0.540
RPA0896
Putative 3-oxoacyl-acyl carrier protein reductase.
  
  
 0.472
RPA1683
3-oxoacyl-acyl carrier protein reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.468
fabG1
Possible 3-oxoacyl-acyl carrier protein reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.443
RPA2417
Putative 3-ketoacyl-CoA reductase.
  
  
 0.442
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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