RPA2190 protein (Rhodopseudomonas palustris CGA009)

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Score

RPA2190

ABC transporter, with duplicated ATPase domains. (605 aa)

Predicted Functional Partners:

RPA2191

0.861

rpmD

0.800

rplU,

0.786

rplD

0.777

rpsI,

0.776

rpsC

0.772

rpsO

0.770

rplC

0.765

rpmH,

0.764

rplM,

0.763

Your Current Organism:

Rhodopseudomonas palustris CGA009

NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPA2190	RPA2191	RPA2190	RPA2191	ABC transporter, with duplicated ATPase domains.	DUF188; Belongs to the UPF0178 family.	0.861
RPA2190	rplC	RPA2190	RPA3250	ABC transporter, with duplicated ATPase domains.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.765
RPA2190	rplD	RPA2190	RPA3249	ABC transporter, with duplicated ATPase domains.	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.777
RPA2190	rplM,	RPA2190	RPA2767	ABC transporter, with duplicated ATPase domains.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.763
RPA2190	rplU,	RPA2190	RPA0158	ABC transporter, with duplicated ATPase domains.	Putative ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20.	0.786
RPA2190	rpmD	RPA2190	RPA3232	ABC transporter, with duplicated ATPase domains.	Ribosomal protein L30; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.800
RPA2190	rpmH,	RPA2190	RPA0634	ABC transporter, with duplicated ATPase domains.	Possible ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.764
RPA2190	rpsC	RPA2190	RPA3244	ABC transporter, with duplicated ATPase domains.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.772
RPA2190	rpsI,	RPA2190	RPA2768	ABC transporter, with duplicated ATPase domains.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.776
RPA2190	rpsO	RPA2190	RPA0433	ABC transporter, with duplicated ATPase domains.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.770
RPA2191	RPA2190	RPA2191	RPA2190	DUF188; Belongs to the UPF0178 family.	ABC transporter, with duplicated ATPase domains.	0.861
rplC	RPA2190	RPA3250	RPA2190	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	ABC transporter, with duplicated ATPase domains.	0.765
rplC	rplD	RPA3250	RPA3249	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.999
rplC	rplM,	RPA3250	RPA2767	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
rplC	rplU,	RPA3250	RPA0158	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Putative ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20.	0.992
rplC	rpmD	RPA3250	RPA3232	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L30; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.996
rplC	rpmH,	RPA3250	RPA0634	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Possible ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.939
rplC	rpsC	RPA3250	RPA3244	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsI,	RPA3250	RPA2768	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.997
rplC	rpsO	RPA3250	RPA0433	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.992