Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPA2209ParB-like nuclease. (296 aa)    
Predicted Functional Partners:
parB2
Possible ParB-like partioning protein; Belongs to the ParB family.
     0.975
RPA2207
Putative recombinase.
 
  
 0.954
gidB
Putative glucose inhibited division protein B (GidB); Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.644
parA
Chromosome partitioning protein, ParA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.635
RPA2239
Putative partition protein.
  
 
 0.635
RPA3154
Possible chromosome partitioning protein ParA.
  
 
 0.635
RPA4077
ATPase, ParA type; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.635
RPA2206
Conserved hypothetical protein.
       0.632
RPA1714
Hypothetical protein.
  
    0.486
RPA2205
Hypothetical protein; COGs COG3311.
  
  
 0.465
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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